STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45989.1InterPro IPR010916; KEGG: ppd:Ppro_2533 prevent-host-death family protein; SPTR: Putative uncharacterized protein. (84 aa)    
Predicted Functional Partners:
AFZ45990.1
PFAM: Plasmid maintenance system killer protein; TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: ddf:DEFDS_0548 plasmid stabilization system; SPTR: Plasmid stabilization system.
 
     0.950
AFZ48394.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.666
AFZ48047.1
KEGG: maq:Maqu_2676 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.547
AFZ48046.1
KEGG: mar:MAE_04200 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.489
AFZ48193.1
Hypothetical protein; KEGG: cyn:Cyan7425_5127 superfamily I DNA and RNA helicase-like protein; SPTR: Superfamily I DNA and RNA helicase-like protein.
  
     0.469
AFZ45988.1
PFAM: Predicted methyltransferase regulatory domain; InterPro IPR013217:IPR018773; KEGG: syn:sll1526 hypothetical protein; PFAM: Methyltransferase regulatory domain, predicted; Methyltransferase type 12; SPTR: Uncharacterized protein sll1526.
       0.436
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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