STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46017.1Thiol-disulfide oxidoreductase DCC; PFAM: Protein of unknown function, DUF393; COGs: COG3011 conserved hypothetical protein; InterPro IPR007263; KEGG: ter:Tery_3618 hypothetical protein; PFAM: thiol-disulphide oxidoreductase DCC; SPTR: Putative uncharacterized protein. (136 aa)    
Predicted Functional Partners:
AFZ48676.1
KEGG: ter:Tery_1554 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.678
AFZ48581.1
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; InterPro IPR007227; KEGG: cyc:PCC7424_3389 rod shape-determining protein MreD; SPTR: Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD.
  
     0.645
AFZ46016.1
PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR020471:IPR001395; KEGG: mar:MAE_16060 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase.
 
     0.611
AFZ48619.1
KEGG: ter:Tery_0603 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.609
AFZ47225.1
KEGG: cyh:Cyan8802_1791 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.602
AFZ46548.1
PFAM: Protein of unknown function (DUF3493); InterPro IPR017441; KEGG: cyt:cce_1927 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.566
AFZ47204.1
KEGG: mar:MAE_56770 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.566
AFZ47205.1
KEGG: cyc:PCC7424_2002 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.564
AFZ48709.1
PFAM: Family of unknown function (DUF490); InterPro IPR007452; KEGG: cyc:PCC7424_2994 protein of unknown function DUF490; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein.
  
     0.556
AFZ46256.1
PFAM: Protein of unknown function (DUF2993); KEGG: cyt:cce_2484 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.532
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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