STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46022.1KEGG: cyc:PCC7424_1151 hypothetical protein; SPTR: Putative uncharacterized protein. (298 aa)    
Predicted Functional Partners:
AFZ46735.1
KEGG: cyc:PCC7424_1845 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
AFZ46848.1
PFAM: Protein of unknown function (DUF2993); KEGG: cyt:cce_0443 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
AFZ47718.1
KEGG: mar:MAE_34900 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
AFZ46976.1
KEGG: cyt:cce_2996 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
AFZ47845.1
KEGG: mar:MAE_41110 hypothetical protein; SPTR: Putative uncharacterized protein ycf39.
  
     0.759
AFZ47846.1
KEGG: cyc:PCC7424_0064 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.756
AFZ48352.1
PFAM: Protein of unknown function (DUF2973); KEGG: cyt:cce_4730 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.754
AFZ48378.1
PFAM: Protein of unknown function (DUF2808); KEGG: cyc:PCC7424_1395 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
AFZ47298.1
PFAM: Fimbrial assembly protein (PilN); COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: cyh:Cyan8802_4211 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein.
  
     0.739
AFZ48776.1
KEGG: ana:alr1246 hypothetical protein; SPTR: Alr1246 protein.
  
     0.736
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.