STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46026.1PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: cyc:PCC7424_1348 peptidase U62 modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Peptidase U62 modulator of DNA gyrase. (446 aa)    
Predicted Functional Partners:
AFZ47023.1
Microcin-processing peptidase 2; PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: mar:MAE_33710 putative modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Similar to tr|Q4C1F5|Q4C1F5_CROWT Peptidase U62.
 
     0.795
AFZ48177.1
PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: amr:AM1_5160 modulator of DNA gyrase, putative; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Modulator of DNA gyrase, putative.
  
     0.558
AFZ46306.1
PFAM: Predicted periplasmic protein (DUF2233); KEGG: cyh:Cyan8802_2070 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.525
AFZ47863.1
KEGG: cyh:Cyan8802_4393 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.495
AFZ46025.1
Nitrogen assimilation regulatory protein; PFAM: Sigma-54 interaction domain; Cyclic nucleotide-binding domain; COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; InterPro IPR000595:IPR002078:IPR017896:IPR017900; KEGG: cyc:PCC7424_3607 cyclic nucleotide-binding protein; PFAM: sigma-54 factor interaction domain-containing protein; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein.
       0.473
AFZ46769.1
PFAM: Protein of unknown function (DUF3370); KEGG: mar:MAE_04620 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.464
AFZ46515.1
KEGG: cyc:PCC7424_5030 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.448
AFZ47036.1
WD-40 repeat-containing protein; PFAM: WD40-like Beta Propeller Repeat; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: cyh:Cyan8802_3347 periplasmic component of the Tol biopolymer transport system-like protein; SPTR: Periplasmic component of the Tol biopolymer transport system-like protein.
  
     0.440
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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