STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46047.1PFAM: Transglutaminase-like superfamily; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: cyt:cce_2150 hypothetical protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Putative uncharacterized protein. (788 aa)    
Predicted Functional Partners:
AFZ46242.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: cyt:cce_0324 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein.
 
  
 0.826
AFZ47027.1
KEGG: cyc:PCC7424_1174 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.661
AFZ46472.1
KEGG: cyt:cce_4744 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.632
AFZ47223.1
PFAM: Protein of unknown function (DUF3352); KEGG: cyc:PCC7424_0630 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.619
AFZ46306.1
PFAM: Predicted periplasmic protein (DUF2233); KEGG: cyh:Cyan8802_2070 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.616
AFZ48789.1
KEGG: cyt:cce_3980 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.608
AFZ46769.1
PFAM: Protein of unknown function (DUF3370); KEGG: mar:MAE_04620 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.603
AFZ47615.1
PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR016366; KEGG: cyt:cce_2735 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: MoxR protein.
 
  
 0.595
AFZ47313.1
KEGG: cyt:cce_0366 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.553
AFZ48729.1
KEGG: ana:alr3583 hypothetical protein; SPTR: Alr3583 protein.
 
     0.551
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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