STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46058.1Hypothetical protein; InterPro IPR020633; KEGG: cyc:PCC7424_4658 hypothetical protein; SPTR: Putative uncharacterized protein. (87 aa)    
Predicted Functional Partners:
AFZ48352.1
PFAM: Protein of unknown function (DUF2973); KEGG: cyt:cce_4730 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ47846.1
KEGG: cyc:PCC7424_0064 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFZ47090.1
Heat shock protein DnaJ domain protein; PFAM: DnaJ domain; InterPro IPR001623:IPR013026; KEGG: cyh:Cyan8802_0556 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Heat shock protein DnaJ domain protein.
  
     0.770
AFZ48730.1
KEGG: syp:SYNPCC7002_A0300 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
AFZ47883.1
PFAM: Protein of unknown function (DUF3177); KEGG: cyc:PCC7424_4076 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.762
AFZ46936.1
KEGG: mar:MAE_31860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.761
AFZ47753.1
KEGG: mar:MAE_35700 hypothetical protein; SPTR: Similar to tr|Q8YR03|Q8YR03.
  
     0.753
AFZ46983.1
KEGG: cyc:PCC7424_4185 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.752
AFZ46272.1
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: cyc:PCC7424_1354 Mo-dependent nitrogenase family protein; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase family protein.
  
     0.751
AFZ47112.1
KEGG: cyc:PCC7424_4776 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.750
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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