STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46074.1KEGG: npu:Npun_F3852 hypothetical protein; SPTR: Putative uncharacterized protein. (129 aa)    
Predicted Functional Partners:
AFZ46500.1
KEGG: cyc:PCC7424_0760 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.756
AFZ47498.1
KEGG: cyh:Cyan8802_3018 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.714
AFZ46310.1
KEGG: cyc:PCC7424_3400 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.698
AFZ46022.1
KEGG: cyc:PCC7424_1151 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.695
AFZ48008.1
KEGG: syp:SYNPCC7002_A0995 hypothetical protein; SPTR: Bacterial SH3 domain family.
  
     0.693
AFZ48095.1
PFAM: Protein of unknown function (DUF3769); InterPro IPR010664; KEGG: cyc:PCC7424_5033 OstA family protein; PFAM: protein of unknown function DUF1239; SPTR: OstA family protein.
  
     0.655
psbZ
Photosystem II core protein PsbZ; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family.
  
     0.647
AFZ48502.1
PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: cyh:Cyan8802_0675 von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A.
  
     0.647
AFZ47066.1
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: cyc:PCC7424_1639 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein.
  
     0.646
AFZ47241.1
KEGG: cyt:cce_3573 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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