STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46135.1PFAM: Protein of unknown function (DUF3529); KEGG: mar:MAE_08520 hypothetical protein; SPTR: Putative uncharacterized protein. (175 aa)    
Predicted Functional Partners:
AFZ48249.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
     0.762
AFZ46903.1
KEGG: mar:MAE_35130 transcriptional regulator; SPTR: Transcriptional regulator.
  
     0.754
thf1
Photosystem II biogenesis protein Psp29; May be involved in photosynthetic membrane biogenesis.
  
    0.727
AFZ48237.1
RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro IPR000504; KEGG: mar:MAE_02510 RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: RNA-binding protein.
  
     0.722
AFZ46842.1
PFAM: Protein of unknown function (DUF3464); KEGG: cyh:Cyan8802_2334 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.721
AFZ46760.1
PFAM: Protein of unknown function (DUF2930); KEGG: syn:slr0948 hypothetical protein; SPTR: Slr0948 protein.
  
     0.711
AFZ48631.1
KEGG: cyc:PCC7424_3505 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.710
AFZ48818.1
PFAM: Protein of unknown function (DUF3539); KEGG: cyt:cce_2716 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.709
AFZ47879.1
KEGG: cyc:PCC7424_4510 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.703
AFZ46193.1
PFAM: Protein of unknown function (DUF3007); KEGG: cyt:cce_2129 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.700
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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