STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46139.1Hypothetical protein; PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein. (427 aa)    
Predicted Functional Partners:
AFZ46910.1
ABC-3 protein; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: cyt:cce_1486 Mn(2+)/Zn(2+) family ABC transporter permease; PFAM: ABC-3 protein; SPTR: ABC-3.
   
  
 0.564
AFZ47830.1
ABC-3 protein; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: cyc:PCC7424_2550 ABC-3 protein; PFAM: ABC-3 protein; SPTR: ABC-3 protein.
   
  
 0.564
AFZ46140.1
Magnesium transporter; Acts as a magnesium transporter.
     
 0.556
AFZ47714.1
Cl- channel voltage-gated family protein; PFAM: CBS domain; Voltage gated chloride channel; Universal stress protein family; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644:IPR006016; KEGG: cyt:cce_0078 chloride channel protein; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; UspA domain-containing protein; SMART: CBS domain containing protein; SPTR: Chloride channel protein.
  
  
 0.424
AFZ46138.1
Allophycocyanin alpha subunit apoprotein; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyc:PCC7424_2634 phycobilisome protein; PFAM: Phycocyanin; SPTR: Phycobilisome protein.
       0.415
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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