STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
psaEPhotosystem I reaction centre subunit IV/PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. (77 aa)    
Predicted Functional Partners:
AFZ47083.1
PFAM: PsaD; InterPro IPR003685; KEGG: cyh:Cyan8802_0387 photosystem I protein PsaD; PFAM: photosystem I protein PsaD; SPTR: Photosystem I protein PsaD.
  
 
 0.999
AFZ47643.1
PFAM: Photosystem I reaction centre subunit III; InterPro IPR003666; KEGG: cyh:Cyan8802_2714 photosystem I reaction center protein PsaF subunit III; PFAM: photosystem I reaction center protein PsaF subunit III; SPTR: Photosystem I reaction center protein PsaF subunit III.
  
 0.999
psaA
Photosystem I core protein PsaA; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.
  
 
 0.999
psaB
Photosystem I core protein PsaB; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.
  
 
 0.999
psaM
PFAM: Photosystem I protein M (PsaM); TIGRFAM: photosystem I reaction center subunit XII; InterPro IPR010010; KEGG: photosystem I reaction center subunit XII; PFAM: photosystem I M family protein; SPTR: Photosystem I reaction center subunit XII; TIGRFAM: photosystem I reaction center subunit XII.
    
 0.999
psaC
Photosystem I iron-sulfur protein PsaC; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized a [...]
  
 
 0.999
psaL
PFAM: Photosystem I reaction centre subunit XI; InterPro IPR003757; KEGG: cyh:Cyan8802_4024 photosystem I reaction centre subunit XI PsaL; PFAM: photosystem I reaction centre subunit XI PsaL; SPTR: Photosystem I reaction centre subunit XI PsaL.
  
 
 0.998
psaK-2
PFAM: Photosystem I psaG / psaK; TIGRFAM: photosystem I reaction center subunit PsaK; InterPro IPR017492:IPR000549; KEGG: cyt:cce_0400 photosystem I reaction center subunit X; PFAM: photosystem I psaG/psaK protein; SPTR: Photosystem I reaction center subunit X; TIGRFAM: photosystem I reaction center subunit PsaK.
  
 
 0.995
psaK
PFAM: Photosystem I psaG / psaK; TIGRFAM: photosystem I reaction center subunit PsaK; InterPro IPR000549:IPR017492; KEGG: syf:Synpcc7942_0407 photosystem I reaction center subunit X; PFAM: photosystem I psaG/psaK protein; SPTR: Photosystem I reaction center subunit X; TIGRFAM: photosystem I reaction center subunit PsaK.
  
 
 0.994
psaJ
Photosystem I reaction centre subunit IX / PsaJ; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.
    
 0.994
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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