STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46150.1Hypothetical protein; KEGG: mar:MAE_56470 porin type major outer membrane protein like; SPTR: Porin type major outer membrane protein like. (152 aa)    
Predicted Functional Partners:
AFZ46673.1
KEGG: cyh:Cyan8802_3627 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
AFZ47674.1
PFAM: Domain of Unknown Function (DUF748); Family of unknown function (DUF490); InterPro IPR007452; KEGG: cyh:Cyan8802_4502 protein of unknown function DUF490; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein.
  
     0.714
AFZ46008.1
PFAM: Protein of unknown function (DUF1049); KEGG: cyh:Cyan8802_1369 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.706
AFZ47297.1
KEGG: cyh:Cyan8802_4210 type II and III secretion system protein; SPTR: Type II and III secretion system protein.
  
     0.670
AFZ46011.1
PFAM: GtrA-like protein; InterPro IPR007267; KEGG: lsl:LSL_1271 cell wall teichoic acid glycosylation protein GtcA; PFAM: GtrA family protein; SPTR: Genome sequencing data, contig C200.
  
     0.662
AFZ47568.1
KEGG: cyc:PCC7424_1557 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.649
AFZ48029.1
SMC domain protein; TIGRFAM: DNA sulfur modification protein DndD; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: cyh:Cyan8802_2920 hypothetical protein; PFAM: SMC domain protein; SPTR: Putative uncharacterized protein.
  
     0.647
AFZ47368.1
Hypothetical protein; KEGG: cyh:Cyan8802_1974 sporulation domain protein; SPTR: Putative uncharacterized protein.
  
     0.631
AFZ47298.1
PFAM: Fimbrial assembly protein (PilN); COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: cyh:Cyan8802_4211 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein.
  
     0.624
AFZ46662.1
KEGG: cyh:Cyan8802_4153 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.623
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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