STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46165.1PFAM: SirA-like protein; KEGG: ava:Ava_0380 SirA-like; SPTR: SirA-like; Belongs to the sulfur carrier protein TusA family. (73 aa)    
Predicted Functional Partners:
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.789
AFZ47564.1
UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901:IPR001763; KEGG: ava:Ava_0994 hypothetical protein; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Molybdopterin biosynthesis protein MoeB.
 
  
 0.764
AFZ46182.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR016454:IPR020578:IPR000192; KEGG: cyp:PCC8801_4043 aminotransferase class V; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase class V; manually curated.
   
 
 0.759
AFZ47569.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192:IPR016454:IPR020578; KEGG: cyh:Cyan8802_1092 cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.759
AFZ48534.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR016454:IPR000192; KEGG: cyt:cce_5234 aminotransferase, class V; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V.
   
 
 0.759
AFZ46249.1
PFAM: Mov34/MPN/PAD-1 family; COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: cyc:PCC7424_2183 Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; SPTR: Mov34/MPN/PAD-1 family protein.
 
     0.590
AFZ46944.1
Protein of unknown function DUF395 YeeE/YedE; PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: amr:AM1_3240 YeeE/YedE family protein, putative; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: Putative uncharacterized protein.
  
  
 0.523
AFZ46945.1
Protein of unknown function DUF395 YeeE/YedE; PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: amr:AM1_3239 YeeE/YedE family protein, putative; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: Putative uncharacterized protein.
  
  
 0.523
AFZ47677.1
Molybdopterin synthase subunit MoaD; PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal; COGs: COG1977 Molybdopterin converting factor small subunit; InterPro IPR003749:IPR010038; KEGG: cyt:cce_2444 thiamineS-like protein; PFAM: thiamineS protein; SPTR: Similar to Cter of sp|P74060|Y821_SYNY3 UPF0084 protein slr0821; TIGRFAM: MoaD family protein.
 
 
 
 0.511
AFZ46164.1
KEGG: hypothetical protein; SPTR: ORF_19.
       0.509
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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