STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46167.1PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; KEGG: syp:SYNPCC7002_A0420 hypothetical protein; SPTR: Putative uncharacterized protein. (288 aa)    
Predicted Functional Partners:
AFZ46674.1
KEGG: syn:slr1826 hypothetical protein; SPTR: Slr1826 protein.
  
     0.651
AFZ47298.1
PFAM: Fimbrial assembly protein (PilN); COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: cyh:Cyan8802_4211 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein.
  
     0.575
AFZ46144.1
KEGG: cyc:PCC7424_4037 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.519
AFZ46272.1
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: cyc:PCC7424_1354 Mo-dependent nitrogenase family protein; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase family protein.
  
     0.503
AFZ47600.1
PFAM: Protein of unknown function (DUF3750); KEGG: cyh:Cyan8802_1668 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.503
AFZ47974.1
PFAM: Protein of unknown function (DUF1449); KEGG: cyt:cce_4338 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.501
AFZ46769.1
PFAM: Protein of unknown function (DUF3370); KEGG: mar:MAE_04620 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.474
AFZ47985.1
KEGG: syn:slr1601 hypothetical protein; SPTR: Slr1601 protein.
  
     0.470
AFZ47506.1
PFAM: Domain of unknown function (DUF1815); InterPro IPR014943; KEGG: cyn:Cyan7425_1036 hypothetical protein; PFAM: Domain of unknown function DUF1815; SPTR: Putative uncharacterized protein.
  
     0.466
AFZ46168.1
KEGG: cyc:PCC7424_3143 CopG domain protein DNA-binding domain protein; SPTR: CopG domain protein DNA-binding domain protein.
       0.463
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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