STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46179.1PFAM: Tryptophan-rich protein (DUF2389); TIGRFAM: tryptophan-rich conserved hypothetical protein; InterPro IPR012663; KEGG: cyt:cce_2206 CHP02450-containing protein; PFAM: Conserved hypothetical protein CHP02450, tryptophan-rich; SPTR: CHP02450-containing protein. (79 aa)    
Predicted Functional Partners:
AFZ48442.1
KEGG: cyc:PCC7424_5093 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
AFZ46219.1
KEGG: cyc:PCC7424_3398 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
AFZ46547.1
Protein of unknown function DUF2358; PFAM: Uncharacterized conserved protein (DUF2358); InterPro IPR018790; KEGG: mar:MAE_47980 hypothetical protein; PFAM: Protein of unknown function DUF2358; SPTR: Similar to tr|Q4C2B1|Q4C2B1_CROWT Hypothetical protein.
  
     0.736
AFZ46068.1
PFAM: ATP synthase I chain; KEGG: npu:Npun_F4857 ptuative ATP synthase protein I; SPTR: ATP synthase I.
  
     0.733
AFZ47762.1
KEGG: cyp:PCC8801_0034 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.715
AFZ48421.1
FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: mar:MAE_54440 FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase.
  
     0.709
AFZ47984.1
KEGG: cyt:cce_3998 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.699
AFZ48000.1
Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: TIGR04168 family protein; InterPro IPR004843; KEGG: cyc:PCC7424_3029 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase.
  
     0.697
AFZ47283.1
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: cyc:PCC7424_0616 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein.
  
     0.664
AFZ46821.1
KEGG: syn:sll0931 hypothetical protein; SPTR: Sll0931 protein.
  
     0.655
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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