STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46193.1PFAM: Protein of unknown function (DUF3007); KEGG: cyt:cce_2129 hypothetical protein; SPTR: Putative uncharacterized protein. (96 aa)    
Predicted Functional Partners:
ndhL
NAD(P)H-quinone oxidoreductase subunit L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
     
 0.822
AFZ47759.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: cyt:cce_2572 photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; PFAM: photosystem II manganese-stabilizing protein PsbO; SPTR: Photosystem II manganese-stabilizing polypeptide.
  
   
 0.820
AFZ46842.1
PFAM: Protein of unknown function (DUF3464); KEGG: cyh:Cyan8802_2334 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
AFZ48274.1
Fibrillin; PFAM: PAP_fibrillin; KEGG: syn:sll1568 fibrillin; SPTR: Fibrillin.
  
     0.766
AFZ48640.1
Protein of unknown function YGGT; PFAM: YGGT family; InterPro IPR003425; KEGG: cyc:PCC7424_3030 protein of unknown function YGGT; PFAM: protein of unknown function YGGT; SPTR: Putative uncharacterized protein.
  
     0.764
AFZ46760.1
PFAM: Protein of unknown function (DUF2930); KEGG: syn:slr0948 hypothetical protein; SPTR: Slr0948 protein.
  
     0.762
AFZ48682.1
PFAM: Protein of unknown function (DUF2499); InterPro IPR019634; KEGG: cyh:Cyan8802_4049 hypothetical protein; PFAM: Protein of unknown function DUF2499; SPTR: Putative uncharacterized protein; manually curated.
  
     0.761
psb28
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; InterPro IPR005610; KEGG: cyt:cce_1599 photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; Belongs to the Psb28 family.
  
     0.759
AFZ48507.1
Hypothetical protein; PFAM: Chloroplast import component protein (Tic20); KEGG: cyc:PCC7424_4804 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
AFZ48724.1
Ferredoxin thioredoxin reductase beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
    0.758
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.