STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46229.1KEGG: syp:SYNPCC7002_A1544 hypothetical protein; SPTR: Putative uncharacterized protein. (221 aa)    
Predicted Functional Partners:
AFZ46768.1
KEGG: cyh:Cyan8802_2727 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
AFZ48775.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1821); KEGG: cyc:PCC7424_1970 hypothetical protein; SPTR: Conserved domain protein.
  
     0.752
AFZ46210.1
Carbon dioxide concentrating mechanism protein; PFAM: Bacterial transferase hexapeptide (three repeats); InterPro IPR001451; KEGG: mar:MAE_47900 carbon dioxide concentrating mechanism protein; SPTR: Genome sequencing data, contig C303.
  
     0.712
AFZ46097.1
PFAM: Protein of unknown function (DUF3288); KEGG: cyn:Cyan7425_2640 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.705
AFZ48591.1
KEGG: cyc:PCC7424_1285 glutamine synthetase inactivating factor IF7; SPTR: Putative uncharacterized protein.
  
     0.702
AFZ47787.1
PFAM: Protein of unknown function (DUF3352); KEGG: cyc:PCC7424_1390 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.676
AFZ46903.1
KEGG: mar:MAE_35130 transcriptional regulator; SPTR: Transcriptional regulator.
  
     0.672
AFZ47298.1
PFAM: Fimbrial assembly protein (PilN); COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: cyh:Cyan8802_4211 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein.
  
     0.661
AFZ47184.1
KEGG: cyp:PCC8801_0357 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.657
AFZ46906.1
Hypothetical protein; KEGG: npu:Npun_F4027 S-layer domain-containing protein; SPTR: S-layer domain protein.
  
     0.638
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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