STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46274.1KEGG: amr:AM1_0698 hypothetical protein; SPTR: Putative uncharacterized protein. (276 aa)    
Predicted Functional Partners:
petG
Cytochrome b6/f complex subunit 5; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.
  
     0.689
AFZ46037.1
Multisubunit sodium/proton antiporter, MrpG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: ter:Tery_1618 hypothetical protein; SPTR: Putative uncharacterized protein; TC 2.A.63.1.
  
     0.641
AFZ46071.1
KEGG: ava:Ava_4789 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.628
AFZ46652.1
KEGG: cyt:cce_1494 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.619
AFZ47949.1
Hypothetical protein; COGs: COG1563 subunit of the Multisubunit Na+/H+ antiporter; KEGG: cyt:cce_1681 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.613
AFZ48094.1
Hypothetical protein; InterPro IPR022272; KEGG: ana:all2511 hypothetical protein; SPTR: All2511 protein.
  
     0.602
AFZ46419.1
Multisubunit sodium/proton antiporter, MrpE subunit; KEGG: cyp:PCC8801_2760 hypothetical protein; SPTR: Multiple resistance and pH regulation; TC 2.A.63.1.
  
     0.593
AFZ46650.1
KEGG: cyt:cce_1492 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.584
AFZ46950.1
Multisubunit sodium/proton antiporter, MrpB subunit; PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; InterPro IPR007182; KEGG: cyt:cce_1680 putative monovalent cation/H+ antiporter subunit B; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: Multiple resistance and pH regulation; TC 2.A.63.1.
  
     0.568
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.547
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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