STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46316.1PFAM: von Willebrand factor type A domain; COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR002035; KEGG: cyt:cce_2760 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein. (413 aa)    
Predicted Functional Partners:
AFZ46315.1
PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; COGs: COG1808 membrane protein; InterPro IPR005240; KEGG: syp:SYNPCC7002_A1894 hypothetical protein; PFAM: protein of unknown function DUF389; SPTR: Conserved hypothetical membrane protein.
       0.727
AFZ47824.1
PFAM: FHA domain; COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: mar:MAE_11260 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: FHA domain containing protein.
 
   
 0.687
AFZ46317.1
PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR000160; KEGG: cyt:cce_2376 two-component response regulator; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver; SPTR: Two-component response regulator; TIGRFAM: diguanylate cyclase.
       0.541
AFZ48149.1
KEGG: cyb:CYB_1389 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.541
AFZ46401.1
PFAM: Protein kinase domain; COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442:IPR000719:IPR020635:IPR002290:IPR 017441; KEGG: cyh:Cyan8802_0122 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase.
  
    0.522
AFZ46234.1
Forkhead-associated protein; PFAM: FHA domain; InterPro IPR000253:IPR018486; KEGG: cyc:PCC7424_3815 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: FHA domain containing protein.
 
   
 0.521
pdhA
Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
       0.443
AFZ47865.1
KEGG: cyc:PCC7424_3670 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.438
AFZ46242.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: cyt:cce_0324 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein.
 
     0.427
AFZ48433.1
PFAM: UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR014017:IPR000212; KEGG: cyh:Cyan8802_3290 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: Putative uncharacterized protein.
  
     0.413
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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