STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46325.1Protein of unknown function DUF1745; PFAM: FIST C domain; FIST N domain; COGs: COG4398 conserved hypothetical protein; InterPro IPR013702:IPR019494; KEGG: cyh:Cyan8802_0940 domain of unknown function DUF1745; PFAM: domain of unknown function DUF1745; FIST C domain; SPTR: Similar to Uncharacterized protein conserved in bacteria. (317 aa)    
Predicted Functional Partners:
AFZ46306.1
PFAM: Predicted periplasmic protein (DUF2233); KEGG: cyh:Cyan8802_2070 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.588
AFZ46769.1
PFAM: Protein of unknown function (DUF3370); KEGG: mar:MAE_04620 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.576
AFZ46324.1
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.516
AFZ47223.1
PFAM: Protein of unknown function (DUF3352); KEGG: cyc:PCC7424_0630 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.467
AFZ48168.1
KEGG: ava:Ava_2463 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.436
AFZ46443.1
PFAM: ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525:IPR000412; KEGG: syp:SYNPCC7002_A2242 ABC-2 type transporter superfamily protein; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter superfamily protein.
  
     0.426
AFZ46228.1
UDP-galactopyranose mutase; PFAM: Flavin containing amine oxidoreductase; Rieske [2Fe-2S] domain; COGs: COG3349 conserved hypothetical protein; InterPro IPR005805:IPR000759:IPR017941:IPR002937; KEGG: cyp:PCC8801_0517 amine oxidase; PFAM: amine oxidase; Rieske [2Fe-2S] iron-sulphur domain; SPTR: Amine oxidase.
  
     0.416
AFZ47517.1
Hypothetical protein; PFAM: Peptidase family M41; KEGG: cyc:PCC7424_4211 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.416
AFZ46068.1
PFAM: ATP synthase I chain; KEGG: npu:Npun_F4857 ptuative ATP synthase protein I; SPTR: ATP synthase I.
  
     0.400
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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