STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46328.1PFAM: Glycosyl transferases group 1; TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyt:cce_3337 putative glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1. (398 aa)    
Predicted Functional Partners:
AFZ48112.1
Lipopolysaccharide biosynthesis protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG0489 ATPase involved in chromosome partitioning; KEGG: cyp:PCC8801_2514 lipopolysaccharide biosynthesis protein; SPTR: Lipopolysaccharide biosynthesis protein.
 
  
 0.781
AFZ46329.1
PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyh:Cyan8802_3797 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2.
    0.754
AFZ48109.1
PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; cyanoexosortase B; exosortase; InterPro IPR019127:IPR013426; KEGG: ter:Tery_2693 eight transmembrane protein EpsH; PFAM: Exosortase EpsH-related; SPTR: Similar to tr|Q8YZG3|Q8YZG3; TIGRFAM: eight transmembrane protein EpsH.
  
     0.746
AFZ46744.1
Hypothetical protein; InterPro IPR008265; KEGG: ava:Ava_0442 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.734
AFZ47473.1
KEGG: cyt:cce_0252 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.728
AFZ48597.1
KEGG: cyh:Cyan8802_4259 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.725
AFZ48110.1
KEGG: cyh:Cyan8802_3594 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.722
AFZ47474.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: mar:MAE_49200 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2.
  
    0.711
AFZ46052.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mar:MAE_59100 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
  
     0.706
AFZ47587.1
HEAT domain containing protein; PFAM: HEAT repeat; InterPro IPR000357:IPR019734:IPR013026; KEGG: cyt:cce_2926 hypothetical protein; PFAM: HEAT domain containing protein; SPTR: Peptidoglycan-binding domain 1.
  
     0.704
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.