STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46336.1PFAM: Protein of unknown function (DUF3172); KEGG: cyc:PCC7424_2329 hypothetical protein; SPTR: Putative uncharacterized protein. (189 aa)    
Predicted Functional Partners:
AFZ48517.1
KEGG: cyc:PCC7424_0310 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ48638.1
PFAM: Ycf66 protein N-terminus; InterPro IPR010004; KEGG: cyt:cce_0737 hypothetical protein; PFAM: Ycf66 family protein; SPTR: Putative uncharacterized protein.
  
     0.774
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
     0.621
AFZ46735.1
KEGG: cyc:PCC7424_1845 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.619
AFZ48156.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: cyt:cce_0488 hypothetical protein; PFAM: GUN4 domain protein; SPTR: Putative uncharacterized protein.
  
     0.612
AFZ48241.1
Hypothetical protein; InterPro IPR017260; KEGG: cyp:PCC8801_2583 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.592
AFZ46337.1
DNA sulfur modification protein DndE; PFAM: Domain of unknown function (DUF1832); TIGRFAM: DNA sulfur modification protein DndE; InterPro IPR014969; KEGG: ana:alr4922 hypothetical protein; PFAM: Domain of unknown function DUF1832; SPTR: Alr4922 protein; TIGRFAM: DNA sulfur modification protein DndE.
       0.584
AFZ48785.1
PFAM: Flavodoxin; Metallo-beta-lactamase superfamily; Flavin reductase like domain; COGs: COG0426 flavoprotein; InterPro IPR008254:IPR002563:IPR001226; KEGG: cyh:Cyan8802_0834 flavin reductase domain protein FMN-binding; PFAM: flavin reductase domain protein FMN-binding; flavodoxin/nitric oxide synthase; SPTR: Flavin reductase domain protein FMN-binding.
  
     0.567
AFZ46113.1
KEGG: ana:all2413 hypothetical protein; SPTR: All2413 protein.
  
     0.555
AFZ47234.1
PFAM: Metallo-beta-lactamase superfamily; Flavin reductase like domain; COGs: COG0426 flavoprotein; InterPro IPR008254:IPR002563; KEGG: cyh:Cyan8802_0685 flavin reductase domain protein FMN-binding; PFAM: flavin reductase domain protein FMN-binding; flavodoxin/nitric oxide synthase; SPTR: Flavin reductase domain protein FMN-binding.
  
     0.552
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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