STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46358.1PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871:IPR005890; KEGG: amr:AM1_5166 nitrate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative nitrate ABC transport ATP-binding protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D. (289 aa)    
Predicted Functional Partners:
AFZ46359.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515:IPR005889; KEGG: syp:SYNPCC7002_A0861 sulfonate/nitrate transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Nitrate ABC transporter, inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit.
 
 0.997
AFZ46361.1
Putative cyanate ABC transporter, substrate binding protein; PFAM: NMT1/THI5 like; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR006311; KEGG: syp:SYNPCC7002_A0860 putative cyanate ABC transporter, substrate binding protein; SPTR: Putative nitrate ABC transport substrate-binding protein.
 
 0.992
AFZ48361.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515:IPR005889; KEGG: cyc:PCC7424_3526 nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Nitrate ABC transporter, inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit.
 
 0.991
AFZ48362.1
Nitrate transport protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR017909:IPR006311; KEGG: cyc:PCC7424_3527 nitrate transport protein; SPTR: Nitrate transport protein.
 
 0.987
AFZ48360.1
PFAM: ABC transporter; NMT1/THI5 like; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR003439:IPR005890:IPR003593; KEGG: cyc:PCC7424_3525 nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D.
 
 
0.950
AFZ46864.1
Assimilatory nitrate reductase (ferredoxin) precursor; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006655:IPR006963:IPR006656:IPR006657; KEGG: cyt:cce_1214 nitrate reductase; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase fam [...]
 
  
 0.946
AFZ48359.1
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR003439:IPR005890:IPR003593; KEGG: syn:sll1453 nitrate transport protein; NrtD; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Nitrate transport protein; NrtD; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D.
  
  
 
0.905
AFZ47042.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: tel:tll1383 ABC transporter permease protein; PFAM: protein of unknown function DUF214; SPTR: ABC transporter permease protein.
 
      0.567
AFZ46357.1
PFAM: Protein of unknown function (DUF1348); COGs: COG3558 conserved hypothetical protein; InterPro IPR009783; KEGG: cyn:Cyan7425_1907 protein of unknown function DUF1348; PFAM: protein of unknown function DUF1348; SPTR: Putative uncharacterized protein.
       0.560
AFZ46360.1
Hypothetical protein.
       0.492
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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