STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46387.1PFAM: Dihaem cytochrome c; InterPro IPR018588; KEGG: mar:MAE_41770 hypothetical protein; PFAM: Dihaem cytochrome c; SPTR: Putative uncharacterized protein. (165 aa)    
Predicted Functional Partners:
AFZ47077.1
KEGG: npu:Npun_R6070 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ46442.1
KEGG: cyt:cce_2662 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.663
AFZ46223.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain; GGDEF domain; FHA domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000253:IPR000014:IPR000160:IPR001633:IPR 013767; KEGG: cyt:cce_2788 hypothetical protein; PFAM: EAL domain protein; Forkhead-associated protein; PAS fold domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; Forkhead-associated protein; PAS domain c [...]
   
 
 0.619
AFZ46539.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR013655:IPR013767:IPR000160:IPR001633:IPR 000014:IPR000700:IPR001610:IPR003018; KEGG: cyc:PCC7424_1286 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-3 domain protein; SMART: EAL domain protein; GGDEF [...]
   
 
 0.619
AFZ46669.1
Protein of unknown function DUF107; PFAM: NfeD-like; COGs: COG1585 Membrane protein implicated in regulation of membrane protease activity; InterPro IPR002810; KEGG: cyc:PCC7424_2246 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative uncharacterized protein.
  
     0.613
AFZ46309.1
Diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain; FHA domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000253:IPR000160:IPR000014; KEGG: cyc:PCC7424_3126 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Forkhead-associated protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS sensor protein.
   
 
 0.598
AFZ46463.1
PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; COGs: COG1816 Adenosine deaminase; InterPro IPR001365; KEGG: cyc:PCC7424_3819 adenosine/AMP deaminase; PFAM: adenosine/AMP deaminase; SPTR: Adenosine/AMP deaminase.
  
     0.586
AFZ46769.1
PFAM: Protein of unknown function (DUF3370); KEGG: mar:MAE_04620 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.565
AFZ48251.1
KEGG: cyt:cce_1563 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.565
AFZ47298.1
PFAM: Fimbrial assembly protein (PilN); COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: cyh:Cyan8802_4211 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein.
  
     0.564
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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