STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46410.1PFAM: Surface antigen; POTRA domain, ShlB-type; COGs: COG2831 Hemolysin activation/secretion protein; InterPro IPR013686:IPR000184; KEGG: cyc:PCC7424_1635 polypeptide-transport-associated domain protein ShlB-type; PFAM: surface antigen (D15); Polypeptide-transport-associated domain protein ShlB-type; SPTR: Polypeptide-transport-associated domain protein ShlB-type. (552 aa)    
Predicted Functional Partners:
AFZ46172.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain; COGs: COG4995 conserved hypothetical protein; InterPro IPR008638; KEGG: npu:Npun_R1218 filamentous haemagglutinin outer membrane protein; PFAM: filamentous haemagglutinin domain protein; SPTR: Filamentous haemagglutinin family N-terminal domain protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein.
 
 
 0.876
AFZ47329.1
COGs: COG4995 conserved hypothetical protein; KEGG: cyt:cce_2173 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.702
AFZ46411.1
PFAM: Sodium/glutamate symporter; COGs: COG0786 Na+/glutamate symporter; InterPro IPR004445; KEGG: syp:SYNPCC7002_A1186 sodium/glutamate symport carrier protein; PFAM: sodium/glutamate symporter; SPTR: Sodium/glutamate symporter superfamily.
       0.610
AFZ46368.1
PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: mar:MAE_54540 PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase.
  
  
 0.594
AFZ47752.1
KEGG: ter:Tery_2245 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.572
AFZ47112.1
KEGG: cyc:PCC7424_4776 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.477
AFZ47123.1
KEGG: cyh:Cyan8802_2316 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.472
AFZ47846.1
KEGG: cyc:PCC7424_0064 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.467
AFZ48493.1
InterPro IPR003368; KEGG: ava:Ava_4725 polymorphic membrane protein; PFAM: Polymorphic membrane protein Chlamydia; SPTR: Polymorphic membrane protein.
 
     0.456
AFZ46725.1
PFAM: Fimbrial Usher protein; COGs: COG3188 P pilus assembly protein porin PapC; InterPro IPR000015; KEGG: syn:slr0019 hypothetical protein; PFAM: fimbrial biogenesis outer membrane usher protein; SPTR: Slr0019 protein.
   
  
 0.443
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.