STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46421.1KEGG: cyh:Cyan8802_2706 hypothetical protein; SPTR: Putative uncharacterized protein. (257 aa)    
Predicted Functional Partners:
AFZ46422.1
PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR003593:IPR017871; KEGG: ana:alr1552 ATP-binding protein of ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: ATP-binding protein of ABC transporter; Belongs to the ABC transporter superfamily.
       0.613
AFZ46420.1
Multisubunit sodium/proton antiporter, MrpD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: ana:all1842 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH dehydrogenase subunit N; TC 2.A.63.1.
       0.498
AFZ46417.1
Multisubunit sodium/proton antiporter, MrpC subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: ana:all1843 putative monovalent cation/H+ antiporter subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: Putative uncharacterized protein; TC 2.A.63.1.
       0.417
AFZ46418.1
Multisubunit sodium/proton antiporter, MrpD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: ana:all1842 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH dehydrogenase subunit N; TC 2.A.63.1.
       0.417
AFZ46419.1
Multisubunit sodium/proton antiporter, MrpE subunit; KEGG: cyp:PCC8801_2760 hypothetical protein; SPTR: Multiple resistance and pH regulation; TC 2.A.63.1.
       0.417
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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