STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46426.1DNA-cytosine methyltransferase; PFAM: HpaII restriction endonuclease; C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525:IPR019062:IPR018117; KEGG: tdn:Suden_1839 DNA (cytosine-5-)-methyltransferase., type II site-specific deoxyribonuclease; PFAM: Restriction endonuclease, type II, HpaII; C-5 cytosine-specific DNA methylase; SPTR: Cytosine-specific methyltransferase; TIGRFAM: DNA-cytosine methyltransferase. (652 aa)    
Predicted Functional Partners:
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.906
speH
Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
     
  0.900
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.900
AFZ46427.1
PFAM: Pentapeptide repeats (8 copies); Tetratricopeptide repeat; COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646:IPR001440:IPR019734:IPR013026; KEGG: cyc:PCC7424_3807 pentapeptide repeat protein; PFAM: pentapeptide repeat protein; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein.
       0.551
AFZ46428.1
PFAM: Protein of unknown function (DUF3146); KEGG: cyh:Cyan8802_1435 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.494
AFZ46425.1
PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; COGs: COG0217 conserved hypothetical protein; InterPro IPR002876; KEGG: cyc:PCC7424_2775 hypothetical protein; PFAM: protein of unknown function DUF28; SPTR: UPF0082 protein Cyan7822DRAFT_3069.
       0.474
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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