STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46428.1PFAM: Protein of unknown function (DUF3146); KEGG: cyh:Cyan8802_1435 hypothetical protein; SPTR: Putative uncharacterized protein. (84 aa)    
Predicted Functional Partners:
AFZ48563.1
Hypothetical protein; InterPro IPR020885; KEGG: cyp:PCC8801_1959 hypothetical protein; SPTR: UPF0367 protein PCC8801_1959; Belongs to the UPF0367 family.
  
     0.772
AFZ47064.1
PFAM: Domain of unknown function (DUF1823); InterPro IPR014952; KEGG: cyh:Cyan8802_3350 domain of unknown function DUF1823; PFAM: Domain of unknown function DUF1823; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ47111.1
PFAM: Protein of unknown function (DUF2839); KEGG: mar:MAE_46470 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
AFZ46900.1
KEGG: cyt:cce_0430 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
AFZ47506.1
PFAM: Domain of unknown function (DUF1815); InterPro IPR014943; KEGG: cyn:Cyan7425_1036 hypothetical protein; PFAM: Domain of unknown function DUF1815; SPTR: Putative uncharacterized protein.
  
     0.756
ndhO
Component of NDH complex; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.727
AFZ48612.1
KEGG: cyh:Cyan8802_3061 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.720
AFZ46848.1
PFAM: Protein of unknown function (DUF2993); KEGG: cyt:cce_0443 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.719
AFZ46948.1
PFAM: Protein of unknown function (DUF2862); KEGG: cyh:Cyan8802_1890 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.713
AFZ47071.1
KEGG: mar:MAE_44570 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.695
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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