STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcyAPhycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family. (245 aa)    
Predicted Functional Partners:
AFZ48408.1
PFAM: Heme oxygenase; COGs: COG5398 Heme oxygenase; InterPro IPR002051:IPR016053; KEGG: cyh:Cyan8802_1414 heme oxygenase; PFAM: Haem oxygenase-like; PRIAM: Heme oxygenase; SPTR: Heme oxygenase.
 
  
 0.979
AFZ47841.1
Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: ter:Tery_0913 oxidoreductase-like; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase-like.
     
 0.959
cpcS
Protein of unknown function CpeS/Ycf58; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.859
cpcS-2
Protein of unknown function CpeS/Ycf58; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.841
AFZ46213.1
PFAM: Protein of unknown function (DUF3110); KEGG: cyc:PCC7424_4978 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
AFZ47879.1
KEGG: cyc:PCC7424_4510 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ48611.1
PFAM: Domain of unknown function (DUF1825); InterPro IPR014954; KEGG: cyh:Cyan8802_0615 domain of unknown function DUF1825; PFAM: Domain of unknown function DUF1825; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ48241.1
Hypothetical protein; InterPro IPR017260; KEGG: cyp:PCC8801_2583 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
AFZ48442.1
KEGG: cyc:PCC7424_5093 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
AFZ46219.1
KEGG: cyc:PCC7424_3398 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.756
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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