STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46460.1KEGG: ter:Tery_3938 hypothetical protein; SPTR: Putative uncharacterized protein. (74 aa)    
Predicted Functional Partners:
AFZ47324.1
KEGG: cyt:cce_1496 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.736
AFZ48619.1
KEGG: ter:Tery_0603 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.679
AFZ48519.1
PFAM: Ferrochelatase; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: cyc:PCC7424_0668 ferrochelatase; PFAM: ferrochelatase; SPTR: Ferrochelatase; Belongs to the ferrochelatase family.
  
     0.661
AFZ46951.1
KEGG: cyt:cce_4700 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.635
AFZ46478.1
KEGG: ter:Tery_0638 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.622
AFZ46256.1
PFAM: Protein of unknown function (DUF2993); KEGG: cyt:cce_2484 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.595
AFZ48342.1
KEGG: cyc:PCC7424_0302 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.584
AFZ46803.1
KEGG: cyt:cce_0532 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.575
AFZ48676.1
KEGG: ter:Tery_1554 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.560
AFZ46669.1
Protein of unknown function DUF107; PFAM: NfeD-like; COGs: COG1585 Membrane protein implicated in regulation of membrane protease activity; InterPro IPR002810; KEGG: cyc:PCC7424_2246 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative uncharacterized protein.
  
     0.554
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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