STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46468.1KEGG: cyp:PCC8801_0555 hypothetical protein; SPTR: Putative uncharacterized protein. (179 aa)    
Predicted Functional Partners:
AFZ47839.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: cyc:PCC7424_1887 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase.
  
     0.711
AFZ46976.1
KEGG: cyt:cce_2996 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.705
AFZ48721.1
KEGG: cyc:PCC7424_4485 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.685
AFZ47865.1
KEGG: cyc:PCC7424_3670 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.680
AFZ47457.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: cyc:PCC7424_1681 PBS lyase heat domain protein repeat-containing protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: PBS lyase HEAT-like repeat domain protein.
  
     0.657
AFZ46897.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyc:PCC7424_0097 protein of unknown function DUF1239; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein.
  
     0.656
AFZ48178.1
KEGG: cyt:cce_0820 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.648
AFZ46773.1
KEGG: cyh:Cyan8802_0695 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.644
AFZ46488.1
KEGG: cyt:cce_0494 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.633
pcxA
CemA family protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the CemA family.
  
     0.631
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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