STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AFZ46519.1Major facilitator superfamily MFS_1; PFAM: Sugar (and other) transporter; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR005829; KEGG: cyt:cce_3842 glucose transport protein; PFAM: major facilitator superfamily MFS_1; SPTR: Glucose transport protein. (464 aa)    
Predicted Functional Partners:
AFZ46520.1
PFAM: Protein of unknown function (DUF3155); KEGG: mar:MAE_14400 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.473
AFZ46264.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Beta-ketoacyl synthase.
     
 0.469
AFZ46265.1
Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Sulfotransferase domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR000639:IPR009081:IPR006162:IPR018201:IPR 000873:IPR006163:IPR014030:IPR014031:IPR014043:IPR013968:I PR000863:IPR000073; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; AMP-dependent synthetase and ligase; Acyl transferase; KR do [...]
     
 0.469
AFZ46518.1
KEGG: syp:SYNPCC7002_A0441 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.458
AFZ46261.1
Methyl-accepting chemotaxis sensory transducer with GAF sensor; PFAM: HAMP domain; GAF domain; Yeast cortical protein KAR9; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR003018:IPR004089:IPR016132; KEGG: cyh:Cyan8802_2776 methyl-accepting chemotaxis sensory transducer with GAF sensor; PFAM: chemotaxis sensory transducer; GAF domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; GAF domain protein; histidine kinase HAMP region domain protein; SPTR: Methyl-a [...]
  
 
 
 0.449
AFZ46011.1
PFAM: GtrA-like protein; InterPro IPR007267; KEGG: lsl:LSL_1271 cell wall teichoic acid glycosylation protein GtcA; PFAM: GtrA family protein; SPTR: Genome sequencing data, contig C200.
  
     0.419
AFZ47413.1
PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000644:IPR003018:IPR000014:IPR001610:IPR 003661:IPR003594:IPR001789:IPR004358:IPR013767:IPR016132:I PR005467:IPR000700; KEGG: ava:Ava_1029 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; CBS domain containing protein; PAS fold domain pro [...]
   
 
 0.407
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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