STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46614.1KEGG: mar:MAE_18190 hypothetical protein; SPTR: Similar to tr|Q1F577|Q1F577_9CHLR Hypothetical protein. (119 aa)    
Predicted Functional Partners:
AFZ46613.1
PFAM: Protein of unknown function (DUF433); InterPro IPR007367; KEGG: syn:ssl8008 hypothetical protein; PFAM: protein of unknown function DUF433; SPTR: Similar to tr|Q6ZE84|Q6ZE84_SYNY3 Ssl8008 protein.
 
   
 0.952
AFZ46688.1
PFAM: Protein of unknown function (DUF1626); COGs: COG5493 conserved hypothetical protein containing a coiled-coil domain; InterPro IPR012431; KEGG: cyh:Cyan8802_4234 protein of unknown function DUF1626; PFAM: protein of unknown function DUF1626; SPTR: Putative uncharacterized protein.
  
     0.544
AFZ46610.1
PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: mac:MA0101 hypothetical protein; PFAM: protein of unknown function DUF86; SPTR: Putative uncharacterized protein.
       0.509
AFZ46611.1
DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: cyt:cce_4349 hypothetical protein; PFAM: DNA polymerase beta domain protein region; SPTR: Putative uncharacterized protein.
       0.509
AFZ46612.1
NAD(P) transhydrogenase, alpha subunit; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; InterPro IPR008143:IPR007886:IPR007698:IPR004571; KEGG: syn:slr1239 NAD(P) transhydrogenase subunit alpha; PFAM: alanine dehydrogenase/PNT domain protein; SPTR: Pyridine nucleotide transhydrogenase alpha subunit; TIGRFAM: NAD(P) transhydrogenase, alpha subunit.
       0.509
AFZ46707.1
KEGG: cyc:PCC7424_2306 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.410
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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