STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46652.1KEGG: cyt:cce_1494 hypothetical protein; SPTR: Putative uncharacterized protein. (256 aa)    
Predicted Functional Partners:
AFZ46651.1
Metallophosphoesterase; InterPro IPR004843:IPR011152; KEGG: cyc:PCC7424_3845 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase.
 
     0.897
AFZ46650.1
KEGG: cyt:cce_1492 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.865
AFZ46274.1
KEGG: amr:AM1_0698 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.619
AFZ47542.1
KEGG: cyt:cce_1477 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.579
AFZ46977.1
KEGG: ter:Tery_1601 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.521
mnmE
tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
       0.517
AFZ47364.1
PFAM: YCII-related domain; InterPro IPR005545; KEGG: cyt:cce_4148 hypothetical protein; PFAM: YCII-related; SPTR: Putative uncharacterized protein.
  
     0.500
AFZ47452.1
KEGG: ter:Tery_1706 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.495
AFZ46950.1
Multisubunit sodium/proton antiporter, MrpB subunit; PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; InterPro IPR007182; KEGG: cyt:cce_1680 putative monovalent cation/H+ antiporter subunit B; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: Multiple resistance and pH regulation; TC 2.A.63.1.
 
     0.485
AFZ47849.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_4107 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.470
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.