STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46670.1Protein of unknown function YGGT; PFAM: YGGT family; InterPro IPR003425; KEGG: mar:MAE_29140 hypothetical protein; PFAM: protein of unknown function YGGT; SPTR: Putative uncharacterized protein. (142 aa)    
Predicted Functional Partners:
sepF
Protein of unknown function DUF552; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.675
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
    0.556
AFZ48193.1
Hypothetical protein; KEGG: cyn:Cyan7425_5127 superfamily I DNA and RNA helicase-like protein; SPTR: Superfamily I DNA and RNA helicase-like protein.
 
     0.524
AFZ48394.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.489
AFZ47845.1
KEGG: mar:MAE_41110 hypothetical protein; SPTR: Putative uncharacterized protein ycf39.
  
     0.477
AFZ46669.1
Protein of unknown function DUF107; PFAM: NfeD-like; COGs: COG1585 Membrane protein implicated in regulation of membrane protease activity; InterPro IPR002810; KEGG: cyc:PCC7424_2246 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative uncharacterized protein.
       0.459
AFZ48819.1
Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.444
AFZ47417.1
KEGG: mar:MAE_32420 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.442
AFZ47113.1
PFAM: S4 domain; TIGRFAM: photosystem II S4 domain protein; COGs: COG2302 conserved hypothetical protein contains S4-like domain; InterPro IPR017506:IPR002942; KEGG: cyc:PCC7424_4774 photosystem II S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Photosystem II S4 domain protein; TIGRFAM: photosystem II S4 domain protein.
  
  
 0.438
AFZ46671.1
Abortive infection protein; PFAM: CAAX amino terminal protease family; COGs: COG1266 metal-dependent membrane protease; InterPro IPR003675; KEGG: cyc:PCC7424_3016 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein.
       0.435
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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