STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46710.1Permease; PFAM: Predicted permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: cyc:PCC7424_4946 permease; PFAM: permease; SPTR: Permease. (345 aa)    
Predicted Functional Partners:
AFZ46709.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1980); TIGRFAM: TIGR03943 family protein; COGs: COG3689 membrane protein; KEGG: cyt:cce_3506 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.951
AFZ47735.1
PFAM: Multicopper oxidase; FG-GAP repeat; COGs: COG2132 Putative multicopper oxidase; InterPro IPR011707:IPR011706:IPR013517:IPR002355; KEGG: ter:Tery_5023 multicopper oxidase, type 2; PFAM: multicopper oxidase type 3; multicopper oxidase type 2; FG-GAP repeat protein; SPTR: Multicopper oxidase type 3.
  
  
 0.574
AFZ46708.1
PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG3920 Signal transduction histidine kinase; InterProIPR016132:IPR005467:IPR000014:IPR000700:IPR 000644:IPR003018:IPR013655:IPR013767:IPR011495:IPR003594:I PR001610; KEGG: cyb:CYB_1653 sensory box histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; GAF domain protein; CBS domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; CBS domain cont [...]
       0.499
AFZ46762.1
PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: cyc:PCC7424_2363 fatty acid desaturase; PFAM: fatty acid desaturase; SPTR: Fatty acid desaturase.
  
     0.492
AFZ46711.1
Hypothetical protein; KEGG: pai:PAE2959 NAD-dependent deacetylase; SPTR: Putative uncharacterized protein.
       0.467
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.463
AFZ48742.1
PFAM: Recombinase; InterPro IPR011109; KEGG: cyc:PCC7424_3086 recombinase; PFAM: Recombinase; SPTR: Recombinase.
  
    0.444
AFZ47119.1
KEGG: cyh:Cyan8802_2720 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.416
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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