STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46719.1KEGG: cyc:PCC7424_2076 hypothetical protein; SPTR: Putative uncharacterized protein. (135 aa)    
Predicted Functional Partners:
AFZ48595.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649; KEGG: cyc:PCC7424_1578 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFZ46125.1
KEGG: cyh:Cyan8802_2637 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.767
AFZ46548.1
PFAM: Protein of unknown function (DUF3493); InterPro IPR017441; KEGG: cyt:cce_1927 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
AFZ46147.1
KEGG: npu:Npun_F0692 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.751
AFZ48818.1
PFAM: Protein of unknown function (DUF3539); KEGG: cyt:cce_2716 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.750
AFZ46272.1
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: cyc:PCC7424_1354 Mo-dependent nitrogenase family protein; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase family protein.
  
     0.717
AFZ48282.1
KEGG: cyh:Cyan8802_2799 transcriptional regulator, XRE family; SPTR: Transcriptional regulator, XRE family.
  
     0.709
AFZ48581.1
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; InterPro IPR007227; KEGG: cyc:PCC7424_3389 rod shape-determining protein MreD; SPTR: Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD.
  
     0.706
AFZ47529.1
KEGG: cyh:Cyan8802_0633 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.696
AFZ48010.1
KEGG: npu:Npun_R4221 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.687
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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