STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46723.1KEGG: cyt:cce_0535 hypothetical protein; SPTR: Putative uncharacterized protein. (119 aa)    
Predicted Functional Partners:
AFZ48245.1
KEGG: cyt:cce_4425 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.662
AFZ46642.1
KEGG: cyt:cce_2107 hypothetical protein; SPTR: Slr0149 protein.
  
     0.645
AFZ48373.1
KEGG: cyt:cce_2451 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.645
AFZ46639.1
KEGG: cyn:Cyan7425_3171 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.633
AFZ46679.1
PFAM: Tic22-like family; InterPro IPR007378; KEGG: syn:slr0924 hypothetical protein; PFAM: Tic22 family proein; SPTR: Slr0924 protein.
  
     0.628
AFZ46640.1
4-vinyl reductase 4VR; PFAM: V4R domain; COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: cyp:PCC8801_1056 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR.
  
     0.615
AFZ46637.1
4-vinyl reductase 4VR; PFAM: V4R domain; COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: cyc:PCC7424_1095 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR.
  
     0.596
AFZ47539.1
KaiA family protein; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC hexamer pho [...]
  
     0.596
AFZ46263.1
KEGG: cyh:Cyan8802_0874 high intensity light-inducible lhc-like protein; SPTR: Possible high light inducible polypeptide HliC.
  
     0.557
AFZ48459.1
DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: cyc:PCC7424_3907 DNA polymerase beta domain protein region; PFAM: DNA polymerase beta domain protein region; SPTR: DNA polymerase beta domain protein region.
  
     0.537
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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