STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46730.1KEGG: mar:MAE_02700 hypothetical protein; SPTR: Similar to tr|P73706|P73706. (204 aa)    
Predicted Functional Partners:
AFZ46688.1
PFAM: Protein of unknown function (DUF1626); COGs: COG5493 conserved hypothetical protein containing a coiled-coil domain; InterPro IPR012431; KEGG: cyh:Cyan8802_4234 protein of unknown function DUF1626; PFAM: protein of unknown function DUF1626; SPTR: Putative uncharacterized protein.
  
     0.711
AFZ46385.1
PFAM: Predicted methyltransferase regulatory domain; InterPro IPR013217:IPR018773; KEGG: syn:sll1526 hypothetical protein; PFAM: Methyltransferase regulatory domain, predicted; Methyltransferase type 12; SPTR: Uncharacterized protein sll1526.
  
     0.562
AFZ45988.1
PFAM: Predicted methyltransferase regulatory domain; InterPro IPR013217:IPR018773; KEGG: syn:sll1526 hypothetical protein; PFAM: Methyltransferase regulatory domain, predicted; Methyltransferase type 12; SPTR: Uncharacterized protein sll1526.
  
     0.553
AFZ46888.1
PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: syn:slr0416 hypothetical protein; PFAM: protein of unknown function DUF29; SPTR: Slr0416 protein.
  
     0.551
AFZ46731.1
PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR000385:IPR007197; KEGG: cyn:Cyan7425_1758 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein.
       0.539
AFZ47220.1
KEGG: mar:MAE_51010 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.517
AFZ48657.1
PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: npu:Npun_F0908 hypothetical protein; PFAM: protein of unknown function DUF29; SPTR: Putative uncharacterized protein.
  
     0.504
AFZ48060.1
KEGG: cyt:cce_3943 hypothetical protein; SPTR: Genome sequencing data, contig C275.
  
     0.495
AFZ48772.1
PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; InterPro IPR010106; KEGG: cyh:Cyan8802_2672 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.480
AFZ46729.1
KEGG: mar:MAE_02710 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    
0.446
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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