STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46747.1Acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Divergent PAP2 family; COGs: COG1963 conserved hypothetical protein; InterPro IPR003832; KEGG: mar:MAE_14560 hypothetical protein; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; SPTR: Putative uncharacterized protein. (150 aa)    
Predicted Functional Partners:
AFZ46748.1
Farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: cyt:cce_0877 geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase superfamily; Belongs to the FPP/GGPP synthase family.
       0.781
AFZ46406.1
Protein of unknown function DUF1731; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR001509:IPR013549:IPR010099; KEGG: cyc:PCC7424_4516 domain of unknown function DUF1731; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein.
   
    0.545
thiE
Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
     
  0.499
AFZ46749.1
PFAM: Protein kinase domain; COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719:IPR017441:IPR008271:IPR017442:IPR 020635:IPR002290; KEGG: cyt:cce_2822 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase.
       0.469
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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