STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46754.1PFAM: Alpha/beta hydrolase of unknown function (DUF1400); COGs: COG4188 dienelactone hydrolase; InterPro IPR010802; KEGG: cyt:cce_2406 hypothetical protein; PFAM: protein of unknown function DUF1400; SPTR: Putative uncharacterized protein. (564 aa)    
Predicted Functional Partners:
AFZ47674.1
PFAM: Domain of Unknown Function (DUF748); Family of unknown function (DUF490); InterPro IPR007452; KEGG: cyh:Cyan8802_4502 protein of unknown function DUF490; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein.
  
     0.712
AFZ47368.1
Hypothetical protein; KEGG: cyh:Cyan8802_1974 sporulation domain protein; SPTR: Putative uncharacterized protein.
  
     0.662
AFZ47298.1
PFAM: Fimbrial assembly protein (PilN); COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: cyh:Cyan8802_4211 fimbrial assembly family protein; PFAM: Fimbrial assembly family protein; SPTR: Fimbrial assembly family protein.
  
     0.631
AFZ47297.1
KEGG: cyh:Cyan8802_4210 type II and III secretion system protein; SPTR: Type II and III secretion system protein.
  
     0.618
AFZ48646.1
PFAM: Protein of unknown function (DUF721); COGs: COG5512 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives; InterPro IPR007922; KEGG: cyh:Cyan8802_1595 protein of unknown function DUF721; PFAM: protein of unknown function DUF721; SPTR: Putative uncharacterized protein.
  
     0.570
AFZ48184.1
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: mar:MAE_10010 porin type major outer membrane protein; PFAM: Carbohydrate-selective porin OprB; S-layer domain-containing protein; SPTR: Porin type major outer membrane protein; TC 1.B.23; Belongs to the OprB family.
  
     0.567
AFZ46642.1
KEGG: cyt:cce_2107 hypothetical protein; SPTR: Slr0149 protein.
  
     0.565
AFZ46540.1
PFAM: Protein of function (DUF2518); InterPro IPR019664; KEGG: cyt:cce_3967 hypothetical protein; PFAM: Protein of unknown function DUF2518; SPTR: Putative uncharacterized protein.
  
     0.563
AFZ48071.1
KEGG: mar:MAE_38030 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.550
AFZ48237.1
RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro IPR000504; KEGG: mar:MAE_02510 RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: RNA-binding protein.
  
     0.550
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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