STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46769.1PFAM: Protein of unknown function (DUF3370); KEGG: mar:MAE_04620 hypothetical protein; SPTR: Putative uncharacterized protein. (451 aa)    
Predicted Functional Partners:
AFZ46306.1
PFAM: Predicted periplasmic protein (DUF2233); KEGG: cyh:Cyan8802_2070 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.715
AFZ48350.1
PFAM: Protein of unknown function (DUF3082); KEGG: cyh:Cyan8802_1651 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.673
AFZ46768.1
KEGG: cyh:Cyan8802_2727 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.664
AFZ47138.1
NLP/P60 protein; PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: cyc:PCC7424_0870 NLP/P60 protein; PFAM: NLP/P60 protein; SPTR: NLP/P60 protein.
  
     0.641
AFZ46229.1
KEGG: syp:SYNPCC7002_A1544 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.623
AFZ47496.1
PFAM: Ferredoxin thioredoxin reductase variable alpha chain; InterPro IPR004207; KEGG: syn:ssr0330 ferredoxin-thioredoxin reductase, variable chain; PFAM: ferredoxin thioredoxin reductase alpha chain; SPTR: Ferredoxin-thioredoxin reductase, variable chain.
  
     0.620
AFZ48772.1
PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; InterPro IPR010106; KEGG: cyh:Cyan8802_2672 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.619
AFZ47706.1
CheA signal transduction histidine kinase; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR004358:IPR008207:IPR004105:IPR003594:IPR 002545:IPR001789:IPR005467; KEGG: cyc:PCC7424_2780 CheA signal transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; C [...]
    
 
 0.614
AFZ46780.1
PFAM: Protein of unknown function, DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR000834; KEGG: cyc:PCC7424_0938 protein of unknown function DUF255; SPTR: Putative uncharacterized protein.
    
   0.604
AFZ46047.1
PFAM: Transglutaminase-like superfamily; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: cyt:cce_2150 hypothetical protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Putative uncharacterized protein.
  
     0.603
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.