STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46780.1PFAM: Protein of unknown function, DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR000834; KEGG: cyc:PCC7424_0938 protein of unknown function DUF255; SPTR: Putative uncharacterized protein. (686 aa)    
Predicted Functional Partners:
AFZ48493.1
InterPro IPR003368; KEGG: ava:Ava_4725 polymorphic membrane protein; PFAM: Polymorphic membrane protein Chlamydia; SPTR: Polymorphic membrane protein.
  
 
   0.658
AFZ46561.1
KEGG: cyc:PCC7424_0472 hypothetical protein; SPTR: Putative uncharacterized protein.
    
   0.604
AFZ46769.1
PFAM: Protein of unknown function (DUF3370); KEGG: mar:MAE_04620 hypothetical protein; SPTR: Putative uncharacterized protein.
    
   0.604
AFZ47556.1
S-layer domain-containing protein; PFAM: S-layer homology domain; InterPro IPR001119; KEGG: syp:SYNPCC7002_A2605 surface layer protein-like protein; PFAM: S-layer domain-containing protein; SPTR: Surface layer protein-like protein.
    
   0.604
AFZ48071.1
KEGG: mar:MAE_38030 hypothetical protein; SPTR: Putative uncharacterized protein.
    
   0.604
AFZ48685.1
KEGG: mar:MAE_16640 alkaline phosphatase; SPTR: Alkaline phosphatase.
    
   0.604
AFZ46779.1
SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; COGs: COG2385 Sporulation protein and related protein; InterPro IPR013693:IPR013486; KEGG: cyh:Cyan8802_1392 SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D; SPTR: SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein.
       0.547
AFZ46781.1
PFAM: Hsp70 protein; COGs: COG0443 Molecular chaperone; InterPro IPR018181:IPR013126:IPR001023; KEGG: cyc:PCC7424_0171 heat shock protein 70; PFAM: Heat shock protein 70; SPTR: Heat shock protein 70.
   
   0.524
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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