STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46814.1PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; FHA domain; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR000253:IPR001264:IPR001460; KEGG: cyc:PCC7424_3011 FHA modulated glycosyl transferase/transpeptidase; PFAM: glycosyl transferase family 51; Forkhead-associated protein; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SMART: Forkhead-associated protein; SPTR: FHA modulated glycosyl transferase/transpeptidase. (744 aa)    
Predicted Functional Partners:
AFZ46677.1
Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460; KEGG: cyc:PCC7424_1853 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase.
 
 
 
 0.804
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
 
 0.787
AFZ48289.1
KEGG: cyh:Cyan8802_0626 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.769
AFZ47557.1
Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001990:IPR001460:IPR017790; KEGG: cyc:PCC7424_2896 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2.
 
 
 
 0.764
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.755
AFZ47493.1
PFAM: Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182:IPR018365; KEGG: ava:Ava_1521 cell cycle protein; PFAM: cell cycle protein; SPTR: Cell cycle protein; Belongs to the SEDS family.
 
 
 
 0.742
AFZ48778.1
PFAM: Transglycosylase SLT domain; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258:IPR000189; KEGG: cyt:cce_1879 soluble lytic transglycosylase; PFAM: Lytic transglycosylase catalytic; SPTR: Probable soluble lytic transglycosylase.
 
  
 0.702
AFZ47781.1
KEGG: cyp:PCC8801_2184 FHA domain-containing protein; SPTR: FHA domain-containing protein.
   
 
 0.660
AFZ48090.1
Diguanylate cyclase with PAS/PAC and GAF sensors; PFAM: Protein kinase domain; GGDEF domain; GAF domain; NB-ARC domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG3899 ATPase; InterProIPR017442:IPR003018:IPR013767:IPR000160:IPR 000719:IPR000014:IPR000700:IPR020635:IPR002290; KEGG: mar:MAE_22800 serine/threonine kinase; PFAM: GGDEF domain containing protein; Serine/threonine-protein kinase-like domain; GAF domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domai [...]
  
 
 0.619
pheS
phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterPro IPR006195:IPR004188:IPR002319:IPR004529; KEGG: cyh:Cyan8802_2477 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; SPTR: Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; Belongs to [...]
       0.616
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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