STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46817.1PFAM: Curli production assembly/transport component CsgG; COGs: COG1462 Uncharacterized protein involved in formation of curli polymers; InterPro IPR005534; KEGG: ana:alr3345 hypothetical protein; PFAM: Curli production assembly/transport component CsgG; SPTR: Alr3345 protein. (335 aa)    
Predicted Functional Partners:
AFZ46819.1
KEGG: ana:alr1620 permease protein of ABC transporter; SPTR: ABC-2 type transporter superfamily.
 
     0.496
AFZ46818.1
Histidine triad (HIT) protein; PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR019808:IPR013217; KEGG: npu:Npun_R5221 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; Methyltransferase type 12; SPTR: Putative uncharacterized protein.
       0.466
AFZ48381.1
Nitric oxide reductase, NorZ apoprotein; PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG3256 Nitric oxide reductase large subunit; InterPro IPR000883; KEGG: amr:AM1_A0139 cytochrome b subunit of nitric oxide reductase; SPTR: Cytochrome b subunit of nitric oxide reductase.
  
     0.457
AFZ46569.1
KEGG: cyc:PCC7424_1285 glutamine synthetase inactivating factor IF7; SPTR: Putative uncharacterized protein.
  
     0.425
ftsH
Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.420
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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