STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46819.1KEGG: ana:alr1620 permease protein of ABC transporter; SPTR: ABC-2 type transporter superfamily. (264 aa)    
Predicted Functional Partners:
AFZ46697.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cyt:cce_3641 ATP-binding protein of ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATP-binding protein of ABC transporter.
 
 
 0.928
AFZ47622.1
PFAM: ABC-type uncharacterized transport system; COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019196; KEGG: ana:alr1621 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Putative uncharacterized protein.
 
  
 0.825
AFZ47368.1
Hypothetical protein; KEGG: cyh:Cyan8802_1974 sporulation domain protein; SPTR: Putative uncharacterized protein.
  
 
 0.751
AFZ48367.1
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; PFAM: ABC transporter; FHA domain; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterProIPR017871:IPR000253:IPR003439:IPR013525:IPR 003593; KEGG: syn:sll0778 ABC transporter; PFAM: ABC transporter related; Forkhead-associated protein; ABC-2 type transporter; SMART: AAA ATPase; Forkhead-associated protein; SPTR: FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits.
  
 
 0.740
AFZ46415.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: cyc:PCC7424_2796 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter.
 
 
 0.705
AFZ46818.1
Histidine triad (HIT) protein; PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR019808:IPR013217; KEGG: npu:Npun_R5221 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; Methyltransferase type 12; SPTR: Putative uncharacterized protein.
       0.695
AFZ47017.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: ava:Ava_1452 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Heme ABC exporter, ATP-binding protein CcmA, putative.
  
 
 0.665
AFZ47401.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mar:MAE_14660 ABC-transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-transporter ATP-binding protein.
  
 
 0.665
AFZ48760.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: npu:Npun_F2805 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related.
  
 
 0.665
AFZ48777.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: mar:MAE_42470 polysaccharide export ABC-transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Similar to tr|Q3MG42|Q3MG42_ANAVT ABC transporter-like.
  
 
 0.665
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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