STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46821.1KEGG: syn:sll0931 hypothetical protein; SPTR: Sll0931 protein. (145 aa)    
Predicted Functional Partners:
AFZ46822.1
KEGG: cyc:PCC7424_3522 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.778
AFZ47158.1
KEGG: cyc:PCC7424_4397 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.767
AFZ48095.1
PFAM: Protein of unknown function (DUF3769); InterPro IPR010664; KEGG: cyc:PCC7424_5033 OstA family protein; PFAM: protein of unknown function DUF1239; SPTR: OstA family protein.
  
  
 0.759
AFZ46897.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyc:PCC7424_0097 protein of unknown function DUF1239; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein.
  
     0.742
AFZ48370.1
PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: mar:MAE_24030 putative O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: Putative O-antigen polymerase.
  
     0.720
AFZ47752.1
KEGG: ter:Tery_2245 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.715
AFZ48683.1
KEGG: syn:sll1381 hypothetical protein; SPTR: Sll1381 protein.
  
     0.711
AFZ47547.1
KEGG: cyt:cce_0904 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.703
AFZ47296.1
PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; COGs: COG4796 Type II secretory pathway component HofQ; InterPro IPR005644:IPR004846; KEGG: cyc:PCC7424_3285 type II and III secretion system protein; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: Type II and III secretion system protein.
  
     0.688
AFZ47689.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1868); KEGG: cyh:Cyan8802_4219 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.686
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.