STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46824.1KEGG: cyc:PCC7424_3084 hypothetical protein; SPTR: Putative uncharacterized protein. (139 aa)    
Predicted Functional Partners:
AFZ46472.1
KEGG: cyt:cce_4744 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.737
AFZ47037.1
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyc:PCC7424_4514 pentapeptide repeat protein; PFAM: pentapeptide repeat protein; SPTR: Pentapeptide repeat protein.
  
     0.729
AFZ47278.1
KEGG: cyt:cce_3936 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.718
AFZ47698.1
KEGG: cyt:cce_2140 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.714
AFZ47186.1
KEGG: syn:slr1796 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.703
AFZ48431.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cyt:cce_3418 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Bacterial extracellular solute-binding protein, putative.
  
     0.698
AFZ48721.1
KEGG: cyc:PCC7424_4485 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.695
AFZ46922.1
PFAM: Protein of unknown function (DUF3038); KEGG: cyt:cce_3697 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.687
AFZ47003.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain; COGs: COG3596 GTPase; InterPro IPR002917; KEGG: ava:Ava_2089 small GTP-binding protein domain-containing protein; PFAM: GTP-binding protein HSR1-related; SPTR: Small GTP-binding protein domain.
  
     0.681
AFZ46428.1
PFAM: Protein of unknown function (DUF3146); KEGG: cyh:Cyan8802_1435 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.670
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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