STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46902.1KEGG: cyn:Cyan7425_4103 hypothetical protein; SPTR: Putative uncharacterized protein. (251 aa)    
Predicted Functional Partners:
AFZ46041.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 0.803
AFZ47984.1
KEGG: cyt:cce_3998 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.746
AFZ47762.1
KEGG: cyp:PCC8801_0034 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.735
AFZ48322.1
PFAM: Protein of unknown function (DUF3120); KEGG: cyc:PCC7424_4190 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.716
AFZ47121.1
KEGG: cyh:Cyan8802_1358 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.692
AFZ46954.1
KEGG: amr:AM1_4429 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.674
AFZ48676.1
KEGG: ter:Tery_1554 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.673
AFZ48802.1
KEGG: cyh:Cyan8802_2890 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.659
AFZ47241.1
KEGG: cyt:cce_3573 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.654
AFZ47467.1
Hypothetical protein; KEGG: cyh:Cyan8802_0343 putative transmembrane anti-sigma factor; SPTR: Putative transmembrane anti-sigma factor.
  
     0.649
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.