STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46906.1Hypothetical protein; KEGG: npu:Npun_F4027 S-layer domain-containing protein; SPTR: S-layer domain protein. (265 aa)    
Predicted Functional Partners:
AFZ46442.1
KEGG: cyt:cce_2662 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.750
AFZ48178.1
KEGG: cyt:cce_0820 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.742
AFZ48775.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1821); KEGG: cyc:PCC7424_1970 hypothetical protein; SPTR: Conserved domain protein.
  
     0.733
AFZ47293.1
KEGG: mar:MAE_52960 hypothetical protein; SPTR: Similar to P74790_SYNY3 Ssr0349 protein.
  
     0.726
AFZ48221.1
PFAM: Protein of unknown function (DUF3086); KEGG: cyc:PCC7424_5081 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.725
AFZ46292.1
Peptidase metallopeptidase; PFAM: Matrixin; COGs: COG5549 Zn-dependent protease; InterPro IPR006026; KEGG: cyc:PCC7424_2212 hypothetical protein; SMART: peptidase metallopeptidase; SPTR: Putative uncharacterized protein.
  
     0.723
AFZ47458.1
KEGG: mar:MAE_04000 glycogen debranching enzyme; SPTR: Glycogen debranching enzyme.
  
     0.719
AFZ46530.1
KEGG: amr:AM1_3843 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.717
AFZ46412.1
KEGG: cyc:PCC7424_4388 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.713
AFZ47372.1
Hypothetical protein; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: cyc:PCC7424_3550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.710
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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