STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ46936.1KEGG: mar:MAE_31860 hypothetical protein; SPTR: Putative uncharacterized protein. (86 aa)    
Predicted Functional Partners:
AFZ46258.1
PFAM: Protein of unknown function (DUF2949); KEGG: cyc:PCC7424_0922 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ47035.1
KEGG: cyh:Cyan8802_4482 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ47753.1
KEGG: mar:MAE_35700 hypothetical protein; SPTR: Similar to tr|Q8YR03|Q8YR03.
  
     0.771
AFZ46720.1
PFAM: Protein of unknown function (DUF3318); KEGG: cyt:cce_3430 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
AFZ46922.1
PFAM: Protein of unknown function (DUF3038); KEGG: cyt:cce_3697 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
AFZ47883.1
PFAM: Protein of unknown function (DUF3177); KEGG: cyc:PCC7424_4076 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
AFZ48352.1
PFAM: Protein of unknown function (DUF2973); KEGG: cyt:cce_4730 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
ndhL
NAD(P)H-quinone oxidoreductase subunit L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.765
AFZ48447.1
KEGG: cyc:PCC7424_4615 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
AFZ46058.1
Hypothetical protein; InterPro IPR020633; KEGG: cyc:PCC7424_4658 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.761
Your Current Organism:
Cyanobacterium stanieri
NCBI taxonomy Id: 292563
Other names: C. stanieri PCC 7202, Cyanobacterium stanieri PCC 7202, Synechococcus cedrorum CCAP 14792a (no longer available), Synechococcus cedrorum CCAP 14792b (no longer available), Synechococcus cedrorum M137/1a, Synechococcus cedrorum SAG 88.79, Synechococcus sp. ATCC 29140, Synechococcus sp. PCC 7202
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